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ABOUT THIS RECORD

ID: MNEST001643
species: Nicotiana tabacum
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTG

miRNA*
 AGTCATCTAGCAGCTTCAAT

mismatches: 2
bulges: 1
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pre-miRNA
 AGTATATATTTGTATGTTGGTTTTTGAGAGGTTGAAGCTGCCAGCATGATCTGGTACGAACAAAGTCCATTTCTTTCTATATATAAATATTTTCTTGCAAA
GAAGAAAAGAAAAGAAAGTCCATTTTTTCTTAAAATTTTGAGGTCTTTTAATTTCCTGTTTTGGGTTTGAAATTGAAGTGATATTTTCGAAAAGAAAATG
GAATTTTTCGAAGTTTTCTTGAAAGAAAATATAGGTATCGTCTTTCATAGGTTTGGTTCCATCAAGTCATCTAGCAGCTTCAATCACTCACCAACAATAC
AGAAACAAATTA

dot-bracket secondary structure
).......(((((((((((((....(((.((((((((((((.((.(((((.((((..((((..((.((............((((..((((((((((...((
(((((...((((((....((((((((((.(((((((.(((...((((((((...(((.....))).))))))..))..))).)))))..)).))))))))
)).))))))....)))))))..))))))))))..))))...........)).)).)))).)))).))))))).)))))))))))).))))))))).))))
))).........


SIMILARITIES
miRBase gma-MIR167c: 4.0E-12

PMRD ppl-miR167b: 4.0E-12

microPC miR167: 2.0E-5		UniProt no hits

RFAM 1MIR167_1: 8.0E-11		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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