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ABOUT THIS RECORD
ID:
MNEST001643
species:
Nicotiana tabacum
miRNA family:
MIR167
source:
miRNEST
Taxonomy by NCBI:
Nicotiana tabacum
Nicotiana
Nicotianeae
Nicotianoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTG
miRNA*
AGTCATCTAGCAGCTTCAAT
mismatches:
2
bulges:
1
View larger
pre-miRNA
GTATATATTTGTATGTTGGTTTTTGAGAGGT
TGAAGCTGCCAGCATGATCTG
GTACGAACAAAGTCCATTTCTTTCTATATATAAATATTTTCTTGCAAA
GAAGAAAAGAAAAGAAAGTCCATTTTTTCTTAAAATTTTGAGGTCTTTTAATTTCCTGTTTTGGGTTTGAAATTGAAGTGATATTTTCGAAAAGAAAATG
GAATTTTTCGAAGTTTTCTTGAAAGAAAATATAGGTATCGTCTTTCATAGGTTTGGTTCCATCA
AGTCATCTAGCAGCTTCAAT
CACTCACCAACAATAC
AGAAACAAATTA
dot-bracket secondary structure
.......(((((((((((((....(((.(((
(((((((((.((.(((((.((
((..((((..((.((............((((..((((((((((...((
(((((...((((((....((((((((((.(((((((.(((...((((((((...(((.....))).))))))..))..))).)))))..)).))))))))
)).))))))....)))))))..))))))))))..))))...........)).)).)))).))))
.))))))).)))))))))))
).))))))))).))))
))).........
SIMILARITIES
miRBase
gma-MIR167c
:
0.000000000004
PMRD
ppl-miR167b
:
0.000000000004
microPC
miR167
:
0.00002
UniProt
no hits
RFAM
MIR167_1: 0.00000000008
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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