ABOUT THIS RECORDspecies: Nicotiana tabacum
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTA miRNA* GATCATGTAGCAGCATCACC mismatches: 3 bulges: 1 |
pre-miRNA
CCACTAGTAGTTGAAGCTGCCAGCATGATCTAAACTTTTCTAGTTGCTCCGTTGAGGAAAGATCAGATCATGTAGCAGCATCACCTGTTGATG
dot-bracket secondary structure
.((.((((((.(((.(((((..(((((((((...(((((((.............)))))))...))))))))).))))).))).)))))).))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCACTAGTAGTTGAAGCTGCCAGCATGATCTAAACTTTTCTAGTTGCTCCGTTGAGGAAAGATCAGATCATGTAGCAGCATCACCTGTTGATG
dot-bracket secondary structure
.((.((((((.(((.(((((..(((((((((...(((((((.............)))))))...))))))))).))))).))).)))))).))
SIMILARITIES| miRBase sly-MIR167: 0.000000000005 PMRD sly-miR167: 0.000000000005 microPC miR167: 0.00000002 | UniProt no hits RFAM MIR167_1: 2e-30 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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