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ABOUT THIS RECORD

ID: MNEST001645
species: Nicotiana tabacum
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGAAAGCTGTGGGAAAATAT

miRNA*
 GCTTTTCCACAGCTTTCTTGA

mismatches: 1
bulges: 0
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pre-miRNA
 ACTCAATTCTGATGAAGTCCTAGTCATGCTTTTCCACAGCTTTCTTGAACTTCTTCTAGCTGAATTTTGATCTCTCTTTAGGCAATTGTGGATAGTTTTAA
TTTGAGAGATGAGATTTAAAGCTCTGAAAGTCCAAGAAAGCTGTGGGAAAATATGGCAATCTTAGGACTTTTTTTTA

dot-bracket secondary structure
).(((....))).(((((((((((((((.((((((((((((((((((.((((..((.((((.((.(((.(((((((...((((.(((...))).))))...
...))))))).))).))..))))..)))))).)))))))))))))))))).)))))).....)))))))))......


SIMILARITIES
miRBase gma-MIR396b: 4.0E-14

PMRD gma-miR396b: 4.0E-14

microPC miR396: 2.0E-13		UniProt no hits

RFAM 6MIR396: 1.0E-11		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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