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ABOUT THIS RECORD

ID: MNEST001656
species: Nicotiana tabacum
miRNA family: MIRf968
source: miRNEST

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGTAAAGCTCAGGAGGGATA

miRNA*
 TCCATCCTGAGTTTCATGGTT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 TGTGGAAATTGCATGGGAAATCTGTAAAGCTCAGGAGGGATAGCACCATGGAGAGACTATACTATCTTCATGAGCTTAAAACTGCGATCCGTTGCGCTAT
CCATCCTGAGTTTCATGGTTTCTTTCATGCTCTCTATT

dot-bracket secondary structure
.(((((....((((((((((.((((.((((((((((.(((((((..((((((((..........))))))))((.......))((((....)))))))))
)).)))))))))).)))))))))..)))))..))))).


SIMILARITIES
miRBase gma-MIR390a: 0.0000000004

PMRD gma-miR390b: 0.000000002

microPC miR390: 1e-44		UniProt no hits

RFAM MIR390: 0.000000008		most similar mature miRNAs

Identical with: miR390 from microPC (MNEST044796)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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