ABOUT THIS RECORDspecies: Nicotiana tabacum
miRNA family: MIR403
source: miRNEST
Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTAGATTCACGCACAAACTCG miRNA* CGTTTGTGCGTGAATCTGACA mismatches: 3 bulges: 0 |
pre-miRNA
AATCTGAAAGAGGCATATTTCACGTTTGTGCGTGAATCTGACAACCCTTTTTTCATCATTAAATCTATTTTTATCTCATGGGTTGTGTTTGTTAGATTCA
CGCACAAACTCGCAATATGTCTTTTCCAACT
dot-bracket secondary structure
....((.((((((((((((....(((((((((((((((((((((.......(((((...((((......))))....)))))......))))))))))))
)))))))))....)))))))))))).))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AATCTGAAAGAGGCATATTTCACGTTTGTGCGTGAATCTGACAACCCTTTTTTCATCATTAAATCTATTTTTATCTCATGGGTTGTGTTTGTTAGATTCA
CGCACAAACTCGCAATATGTCTTTTCCAACT
dot-bracket secondary structure
....((.((((((((((((....(((((((((((((((((((((.......(((((...((((......))))....)))))......))))))))))))
)))))))))....)))))))))))).))...
SIMILARITIES| miRBase tcc-MIR403a: 0.000000002 PMRD stu-miR403: 5e-16 microPC miR403: 0.000002 | UniProt no hits RFAM MIR403: 0.00003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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