ABOUT THIS RECORDspecies: Nuphar advena
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Nuphar advena Nuphar Nymphaeaceae Nymphaeales basal Magnoliophyta Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCGTCATCATCATCACCA miRNA* GTGGTGGCGATGGCGGCGCT mismatches: 2 bulges: 1 |
pre-miRNA
TGGATGCCTCAATCATCATCATGCCTGCGGTGGTGGTGGCGATGGCGGCGCTTCTTTTCATCGTCATCGTCATCATCATCACCACCATGTTGGTATTTGT
GACGGCCGTATCC
dot-bracket secondary structure
.((((((.....((.((((.(((((.(((((((((((((.((((((((.((...........))..)))))))).)))))))))))..)).)))))..))
)).))..))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TGGATGCCTCAATCATCATCATGCCTGCGGTGGTGGTGGCGATGGCGGCGCTTCTTTTCATCGTCATCGTCATCATCATCACCACCATGTTGGTATTTGT
GACGGCCGTATCC
dot-bracket secondary structure
.((((((.....((.((((.(((((.(((((((((((((.((((((((.((...........))..)))))))).)))))))))))..)).)))))..))
)).))..))))))
SIMILARITIES| miRBase ath-MIR414: 0.00009 PMRD ghr-miR414d: 0.00009 microPC no hits | UniProt no hits RFAM mir-598: 0.00002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
