ABOUT THIS RECORDspecies: Ocimum basilicum
miRNA family: MIRf1262
source: miRNEST
Taxonomy by NCBI:
Ocimum basilicum Ocimum Ocimeae Nepetoideae Lamiaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGATGATGAGGCCACTCCATC miRNA* TGTGGTGGCATCATCCTCGGC mismatches: 5 bulges: 0 |
pre-miRNA
TACAGTCTGGTAGTCTTCCCCGAAACAAATTCTGTGGTGGCATCATCCTCGGCATAGTATTGTTCTGTGTTGCTACAACACCACAACCGATTGGCGAACC
AAAAAGATTTGTCACTGCTGATGATGAGGCCACTCCATCACTCCCACCAGATTGTCGACTTCTGATAT
dot-bracket secondary structure
.(((((((((((((.......(((.....)))((.((((((.(((((.((((((..((.((((...((((((...)))))).))))...))(((((((..
.......))))))).)))))).))))).)))))).))..)))...)))))))))).............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TACAGTCTGGTAGTCTTCCCCGAAACAAATTCTGTGGTGGCATCATCCTCGGCATAGTATTGTTCTGTGTTGCTACAACACCACAACCGATTGGCGAACC
AAAAAGATTTGTCACTGCTGATGATGAGGCCACTCCATCACTCCCACCAGATTGTCGACTTCTGATAT
dot-bracket secondary structure
.(((((((((((((.......(((.....)))((.((((((.(((((.((((((..((.((((...((((((...)))))).))))...))(((((((..
.......))))))).)))))).))))).)))))).))..)))...)))))))))).............
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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