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ABOUT THIS RECORD

ID: MNEST001683
species: Ocimum basilicum
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Ocimum basilicum Ocimum Ocimeae Nepetoideae Lamiaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCTGGCTCCTTGTATGCCA

miRNA*
 GCATGCTCGGAGCCATGCATG

mismatches: 3
bulges: 0
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pre-miRNA
 CTGTTTTGAAGGTATGTTTGTGTGCCTGGCTCCTTGTATGCCATTCGTGGAGTCTATCCATGCGCGGCCAGCCTTCGTGGATGGCATGCTCGGAGCCATG
CATGCATGCTTTCGCATTGTCTC

dot-bracket secondary structure
......(((((((((((....((((.(((((((..(((((((((((((((((.((..((......))..)).)))))))))))))))))..))))))).)
)))))))))))))).........


SIMILARITIES
miRBase tcc-MIR160b: 0.000000002

PMRD mtr-miR160d: 0.000006

microPC miR160: 6e-40		UniProt no hits

RFAM mir-160: 0.0001		most similar mature miRNAs

Identical with: miR160 from microPC (MNEST046515)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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