ABOUT THIS RECORDspecies: Panax ginseng
miRNA family: MIRf34
source: miRNEST
Taxonomy by NCBI:
Panax ginseng Panax Araliaceae Apiineae Apiales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATATTAGGACGGAGGGAGT miRNA* TCCCTCTTTCCTGAAATGGGG mismatches: 5 bulges: 0 |
pre-miRNA
TTCTATGTTAAACATCTTATTCTCCCTCTTTCCTGAAATGGGGTACCTTTTCTTTGTAATTGGTACTCTTTATATTAGGACGGAGGGAGTACTATCTTTG
GTAGTTGGG
dot-bracket secondary structure
....((((...))))......((((((((.((((((.((((((((((..((......))..))))))))..)).)))))).)))))))).((((((...)
)))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTCTATGTTAAACATCTTATTCTCCCTCTTTCCTGAAATGGGGTACCTTTTCTTTGTAATTGGTACTCTTTATATTAGGACGGAGGGAGTACTATCTTTG
GTAGTTGGG
dot-bracket secondary structure
....((((...))))......((((((((.((((((.((((((((((..((......))..))))))))..)).)))))).)))))))).((((((...)
)))))....
SIMILARITIES| miRBase no hits PMRD osa-miRf11954-akr: 0.0003 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
