miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST001691
species: Panicum virgatum
miRNA family: MIRf10
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTCGTCTCGCGATTTACAAC

miRNA*
 TGTAAATCGCGAAACGAATCT

mismatches: 1
bulges: 0
View larger
pre-miRNA
 GAATTTTATCAATTTGAAATACTAAATGAAATCTATTTACAAAACTTTTTACACAGATGGGTTGTAAATCGCGAAACGAATCTAATGATGCTAATTAATC
CATGATTAATTAATAATCAGCGGATGGTTACTGTAGCATCACTGTTGCAAATCATAGATTAAATAGGCTCATTAGATTCGTCTCGCGATTTACAACCCAC
CCATGCAAAAAAGTTTTGTAAATAGACTTTATTTAGTACTTCAAGTTTTCGCAAA

dot-bracket secondary structure
..........((((((((.(((((((((((.(((((((((((((((((((...((..(((((((((((((((((.(((((((((((((..(((.((((((
.((((((...((((.(((....))).)))).(((((((....))))))))))))).)))))).)))..))))))))))))).))))))))))))))))).
...))..))))))))))))))))))).))))))))))).))))))))........


SIMILARITIES
miRBase osa-MIR2124a: 0.00001

PMRD osa-miRf10310-akr: 0.0000000009

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;