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ABOUT THIS RECORD
ID:
MNEST001708
species:
Panicum virgatum
miRNA family:
MIR1439
source:
miRNEST
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGAACGGAGGGAGTAGA
miRNA*
TACTCCCTCTGTTCCAAAATG
mismatches:
0
bulges:
0
View larger
pre-miRNA
AGACATAAGTTC
TACTCCCTCTGTTCCAAAATG
TTGGTCATTTTGACTTTTCTAGATTCATATATTTTGTTATGTACATAGACATATGTTATATCTAGGT
GCATAGCAAATACTATGAATCTAAAAAAACCAAAACGACCTACA
TTTTGGAACGGAGGGAGTAGA
TAGCAAATT
dot-bracket secondary structure
........((((
(((((((((((((((((((((
(.((((.(((((..((((.((((((((((...((((((((((((.((((.(((...))).)))).))
))))))))))...)))))))))).))))..))))).)))).)))
)))))))))))))))))))))
..)).....
SIMILARITIES
miRBase
tae-MIR1137
:
0.0001
PMRD
tae-miR1137
:
0.0001
microPC
miR1439
:
0.0000000006
UniProt
no hits
RFAM
MIR1122: 0.000000003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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