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ABOUT THIS RECORD

ID: MNEST001711
species: Panicum virgatum
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTACATTTTGAAACGGAGGGA

miRNA*
 CCTCTGTTTCAAAATGTAGGT

mismatches: 0
bulges: 0
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pre-miRNA
 ACCAATTCTTTAGATGATACTCCCTCTGTTTCAAAATGTAGGTTGTTTTGGTTTTTTTAGGTTCATAGTGTTTGCTAAGCATCTTTATATAACATATATG
TCTAGATACATAGCAAAATATATGAATTTAGAAAAGTTTAAACGACCTACATTTTGAAACGGAGGGAGTACATAGAGTGTCTTGGA

dot-bracket secondary structure
.((((..(((((..((.(((((((((((((((((((((((((((((((.((((((((((((((((((...(((((((...((((.((((((...))))))
...))))...)))))))...)))))))))))))))))).))))))))))))))))))))))))))))))))))))))....)))).


SIMILARITIES
miRBase osa-MIR806c: 0.0000006

PMRD osa-miR806c: 0.0000006

microPC miR1439: 0.000009		UniProt no hits

RFAM MIR1122: 0.0000007		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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