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ABOUT THIS RECORD

ID: MNEST001717
species: Panicum virgatum
miRNA family: MIR827
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTAGATGACCATCAGCAAACA

miRNA*
TTTTGTTGGTGGTCACCTAACC

mismatches: 1
bulges: 1

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pre-miRNA
AGCGAGTGCAGCTCCGAACTTGTTTTGTTGGTGGTCACCTAACCATGCTCCGGTTAGTGCACGGATCATGTCCATGACCTCATCTCGATCGTGCAAAGGT
TAGATGACCATCAGCAAACA
TGTTCACGAGACATGCAAA


dot-bracket secondary structure
......((((.(((.((((.(((((.(((((((((((.((((((.(((..(((((((..((.((((...)))).)).......)).))))).)))..)))
))).))))))))))))))))
.))))..)))...))))..



SIMILARITIES
miRBase bdi-MIR827: 0.0000000001

PMRD osa-miR827b: 0.000002

microPC miR827: 0.00003
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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