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ABOUT THIS RECORD
ID:
MNEST001731
species:
Panicum virgatum
miRNA family:
MIRf88
source:
miRNEST
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCCGGTTGGTGTTACCAACC
miRNA*
GTGGTAACACCAACCCGGACT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGGGACAAAAGGCCCAACCCTTTTTATCCCGGG
GTGGTAACACCAACCCGGACT
AAAGGGTGACCCTTTTG
TCCCGGTTGGTGTTACCAACC
CGGACAAA
AGGCCCCTTTTGTCCCGGTTGG
dot-bracket secondary structure
.(((((((((((......((((((....(((((
.((((((((((((((.((((.
((((((...)))))).)
))).)))))))))))))).))
)))..)))
)))..)))))))))))......
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10997-akr
:
0.00000002
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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