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ABOUT THIS RECORD

ID: MNEST001774
species: Panicum virgatum
miRNA family: MIR319
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGACTGAAGGGTGCTCCC

miRNA*
GAGCTCTCTTCAGTCCACTC

mismatches: 3
bulges: 0

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pre-miRNA
CTCTGGAAGAGAGCTCTCTTCAGTCCACTCTGAAATGGCCGTAGGGTTTCATTAGCTGCCGACTCATCCATTCACCTACCAAGATCCATGGACGCGGAAT
GTCTTGGTAGCTGATTGGATGGCGCGGGAGCTAAAATTAAGCTCTACGCTGTTTGTGGTTGGACTGAAGGGTGCTCCCTTGCTCG


dot-bracket secondary structure
......(((.((((.((((((((((((.((..(((((((.(((((((((.(((((((.(((..(((((((.(((.((((((((((((........)))..
.))))))))).))).)))))))..))).)))))..)).))))))))))))))))..)).)))))))))))).)))).))).....



SIMILARITIES
miRBase zma-MIR319a: 2e-68

PMRD zma-miR319a: 2e-68

microPC miR319: 0.0000000006
UniProt no hits

RFAM MIR159: 8e-56
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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