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ABOUT THIS RECORD
ID:
MNEST001854
species:
Panicum virgatum
miRNA family:
MIRf197
source:
miRNEST
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCGTTGATGATCTCTGAGTA
miRNA*
CTCAGGATCTCAATCTGAG
mismatches:
3
bulges:
2
View larger
pre-miRNA
CGATCACGCT
CTCGTTGATGATCTCTGAGTA
GGAGTGCCCCTTCTTC
CTCAGGATCTCAATCTGAG
CCATCAT
dot-bracket secondary structure
.(((...(((
(..(((((.((((.(((((.(
((((......))))).
))))))))))))))..)))
).)))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q01292|ILV5_SPIOL: 0.000007
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record