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ABOUT THIS RECORD

ID: MNEST001875
species: Parthenium argentatum
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Parthenium argentatum Parthenium Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AATGGGACGGAGGGAGTATTA

miRNA*
 TTACTACCTCCGTCCCATTTA

mismatches: 2
bulges: 0
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pre-miRNA
 AATCATCTTTTATTACTACCTCCGTCCCATTTAAAGTGTCATATTTTGAATTTTCAAAGTCTTTATTTATAAACTTTGACCTTAAATAATTTTGTTTGCG
TTCGATAATACTTGATGAAAGTTATATGATTCGAGTGTGTTTTAGAAGTGTTTTTATCGGTATAATTTTCATCAAGTTTTATATAACACAAAAAATACAT
AATTAAGGTCAAAGTATATAAATAAAGACTTTGAAAATTCAAAATAGGACACTTTTAATGGGACGGAGGGAGTATTATTATTATTA

dot-bracket secondary structure
..........((.((((.(((((((((((((.((((((((.((((((((((((((((((((((((((((((.(((((((((((((.((...((.((((.(
((..((((.(((((((((((((((((....((((......................))))))))))))))))))))).))))..))).)))).))....)
).))))))))))))).)))))))))))))))))))))))))))))).)))))))).))))))))))))).)))).)).........


SIMILARITIES
miRBase no hits

PMRD osa-miRf11216-akr: 0.00006

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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