ABOUT THIS RECORDspecies: Parthenium argentatum
miRNA family: MIR1536
source: miRNEST
Taxonomy by NCBI:
Parthenium argentatum Parthenium Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGCAGAGATAAATGTGTTTG miRNA* AATGCATCTGGTTCACTACT mismatches: 4 bulges: 1 |
pre-miRNA
AGTGTATCATGGAATGCATCTGGTTCACTACTTGCAACTTGTAGCAGAGATAAATGTGTTTGGATATGGGA
dot-bracket secondary structure
...(((((...((((((((.((.(((.((((.........))))..))).)).)))))))).)))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
AGTGTATCATGGAATGCATCTGGTTCACTACTTGCAACTTGTAGCAGAGATAAATGTGTTTGGATATGGGA
dot-bracket secondary structure
...(((((...((((((((.((.(((.((((.........))))..))).)).)))))))).)))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|B6H7A3|CIAO1_PENCW: 0.00003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
