ABOUT THIS RECORDspecies: Parthenium argentatum
miRNA family: MIRf264
source: miRNEST
Taxonomy by NCBI:
Parthenium argentatum Parthenium Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCAAACCCGAACCTGAACCTG miRNA* GGTTCAGGTTCAGGTTCAGGT mismatches: 3 bulges: 0 |
pre-miRNA
GGTTTAGCCCCAGGTTCAGGTTCAGGTTCAGGTTCGTTCAAAGAGCCCAAACCCGAACCTGAACCTGAGAAAGTTC
dot-bracket secondary structure
(((...))).(((((((((((((.((((..(((((.......)))))..)))).))))))))))))).........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGTTTAGCCCCAGGTTCAGGTTCAGGTTCAGGTTCGTTCAAAGAGCCCAAACCCGAACCTGAACCTGAGAAAGTTC
dot-bracket secondary structure
(((...))).(((((((((((((.((((..(((((.......)))))..)))).))))))))))))).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
