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ABOUT THIS RECORD

ID: MNEST001890
species: Paullinia cupana var. sorbilis
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Paullinia cupana var. sorbilis Paullinia cupana Paullinia Sapindaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGAAGCAGGGCACGTGCA

miRNA*
CATGTGCCCCTCTTCCCCATC

mismatches: 5
bulges: 0

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pre-miRNA
GTGTGTAGAGCAAGATGGAGAAGCAGGGCACGTGCATTACTAACTCACCAACCATAAAAAACACTGACACATAAATTCAATTGATTGAGTTAGTTCTTCA
TGTGCCCCTCTTCCCCATC
ATGAACCACTCC


dot-bracket secondary structure
(((.((....((.(((((.((((..(((((((((....(((((((((.(((.............................)))..)))))))))....))
)))))))..)))).)))))
.)).)))))...



SIMILARITIES
miRBase ctr-MIR164: 3e-20

PMRD ptc-miRf11320-akr: 5e-16

microPC miR164: 5e-53
UniProt no hits

RFAM MIR164: 5e-16
most similar mature miRNAs

Identical with: miR164 from microPC (MNEST046528)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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