ABOUT THIS RECORDspecies: Petunia axillaris subsp. axillaris
miRNA family: MIRf1469
source: miRNEST
Taxonomy by NCBI:
Petunia axillaris subsp. axillaris Petunia axillaris Petunia Petunioideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGGAGTACGATGATGATGAT miRNA* GTCTTAAGTGTATTTTTCTA mismatches: 5 bulges: 1 |
pre-miRNA
AAGGTGGCCAAGAGGAGTACGATGATGATGATGATAATGAGGGAAACGAGGAGGAAGAGGTTGAACATCCCGGTGAAGTCTCTATAGGGAAGAAGATTTG
GACTTTCATCACCACATAGTGAAGACCTAAAAGACTGCGCGCTAGTTGCATGTCTTAAGTGTATTTTTCTAGGCATGTT
dot-bracket secondary structure
......(((.(((((((((((.....(((.(((.((((...((...((.((......(((((..((.....((((((((((..((..........))..)
))))....))))).....))...)))))......)).))..)).)))))))))).....))))))))))).))).....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AAGGTGGCCAAGAGGAGTACGATGATGATGATGATAATGAGGGAAACGAGGAGGAAGAGGTTGAACATCCCGGTGAAGTCTCTATAGGGAAGAAGATTTG
GACTTTCATCACCACATAGTGAAGACCTAAAAGACTGCGCGCTAGTTGCATGTCTTAAGTGTATTTTTCTAGGCATGTT
dot-bracket secondary structure
......(((.(((((((((((.....(((.(((.((((...((...((.((......(((((..((.....((((((((((..((..........))..)
))))....))))).....))...)))))......)).))..)).)))))))))).....))))))))))).))).....
SIMILARITIES| miRBase bna-MIR166c: 0.0006 PMRD bna-miR166c: 0.0006 microPC no hits | UniProt no hits RFAM mir-598: 0.0007 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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