miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST001898
species: Phaseolus acutifolius
miRNA family: MIR773
source: miRNEST

Taxonomy by NCBI:
Phaseolus acutifolius Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTGATTTCAGCTTTTGTCCA

miRNA*
 TTGAAGGCTGAAAGAAGG

mismatches: 3
bulges: 2
View larger
pre-miRNA
 TCTGCCGTCCCTTTGATTTCAGCTTTTGTCCAGGCAGAGTTACTATTTTTCACTTTGCATGTGGGCTTTCATCTACCATCCCACAGTGCAGTCCCAGGCT
CATAGCTGGTCTCGTGGGAGATGAAAAAGGATTACTATGCCTTCACTCCTGGTTTAAGCAGTGTAGTATAACTTTTAGCTCCTGCTACTTGCATTGCCAT
ATTGATTGGGGAACATGTTTTGGATCCTCTGCTTCTTGAAGGCTGAAAGAAGGTCATATGA

dot-bracket secondary structure
.........(((((..((((((((((((...((((((((.........((((....((((((((...........)).((((.((((.((((....(((.
....((.(((...(((((((....(((((.(((((..(((....(((...)))....)))..)))))....)))))..))))))).))).))...)))..
))))))))))))))))))..))))..))))))))..)))))))))))))))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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