ABOUT THIS RECORDspecies: Phaseolus acutifolius
miRNA family: miR3951
source: miRNEST
Taxonomy by NCBI:
Phaseolus acutifolius Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGATAAAGATGAGAGAAGAG miRNA* CCGTTTCTTCTTTTCTTTCTTTCTT mismatches: 3 bulges: 1 |
pre-miRNA
GAAAAAAGAGCTAAAGAAAGGGATAGAAAGAGAGATAAAGATGAGAGAAGAGCTGGAGAGGACTAAAGAGAGGTTAAGGTTGGTTGAAGACGCTGAGGAG
ATGCTCTGTTCGCAATTGGGCGAGCTCGAGGCTGAGGCCGTCATGCACGCTCGSCAGTACCAACTCCGCGTCGCCGAGCTCTCCGATCAGCTCGCCCGCG
CTCTCCAGAGATAGCGCCCAGATTGATCTGGATCTCTTGCGCCGTTTCTTCTTTTCTTTCTTTCTTGTTTTTTTAATTTGTTTGGTTT
dot-bracket secondary structure
.......((((((((.(((..((.((((.((((((.(((((.((((((((.((.(((((.((((.......))))..(((.((((((.........((((
(.((((.((.(((...((((((.((..(((((....))).))..)).))))))..(((....)))..)))..)).)))))))))..)))))).))).(((
((.((....)).)))))(((((....))))).))))).))....)))).)))).))))).)))))).)))).))..))).))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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GAAAAAAGAGCTAAAGAAAGGGATAGAAAGAGAGATAAAGATGAGAGAAGAGCTGGAGAGGACTAAAGAGAGGTTAAGGTTGGTTGAAGACGCTGAGGAG
ATGCTCTGTTCGCAATTGGGCGAGCTCGAGGCTGAGGCCGTCATGCACGCTCGSCAGTACCAACTCCGCGTCGCCGAGCTCTCCGATCAGCTCGCCCGCG
CTCTCCAGAGATAGCGCCCAGATTGATCTGGATCTCTTGCGCCGTTTCTTCTTTTCTTTCTTTCTTGTTTTTTTAATTTGTTTGGTTT
dot-bracket secondary structure
.......((((((((.(((..((.((((.((((((.(((((.((((((((.((.(((((.((((.......))))..(((.((((((.........((((
(.((((.((.(((...((((((.((..(((((....))).))..)).))))))..(((....)))..)))..)).)))))))))..)))))).))).(((
((.((....)).)))))(((((....))))).))))).))....)))).)))).))))).)))))).)))).))..))).))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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