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ABOUT THIS RECORD
ID:
MNEST001925
species:
Picea engelmannii x Picea glauca
miRNA family:
MIR169
source:
miRNEST
Taxonomy by NCBI:
Picea engelmannii x Picea glauca
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGCCAAGAATGACTTGCCCG
miRNA*
CGGCAAGCATTCTTGTCCCGG
mismatches:
3
bulges:
1
View larger
pre-miRNA
GTTCGTGTAGCGTCTCGTATGTAAAGGTAGAGCGTGTTACT
CGGCCAAGAATGACTTGCCCG
CATCCTGTCGTGCAATATGGTTGCACATACACATTACA
GTCTGCC
CGGCAAGCATTCTTGTCCCGG
CATCGCTCTCTTCTTTTCATGCCGGGCCCTGCATGACG
dot-bracket secondary structure
..((((((((.((((.(((((.(((((.((((((((((...
.((.((((((((.((((((.(
((..((((.(((((((...))))))).........)))
)..))).
.)))))))))))))).)).))
)).))))))..))))).))))).)))).))))))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
miR169
:
0.0000000000006
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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