ABOUT THIS RECORDspecies: Picea engelmannii x Picea glauca
miRNA family: miR3704
source: miRNEST
Taxonomy by NCBI:
Picea engelmannii x Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGTCTAGGTGGAGTTGGAAAAA miRNA* TTTCCTCTCCTCCCAGACCCA mismatches: 3 bulges: 1 |
pre-miRNA
GATAAAGTAGGGATGTGTAGTGAAGGCAATAGGTCTAGGTGGAGTTGGAAAAACTATAACAATGCCTATATCACATCAGATCAGATGAGATCATGAGTGA
CTGCATGAGTTTTTCCTCTCCTCCCAGACCCAGTGGCCTTAAAACTACATGACATCCCTG
dot-bracket secondary structure
.......((((((((((((((.(((((....(((((.((.((((..(((((((((......((((.....((((.(((((((......)))).)))))))
..)))).))))))))).)))).)).))))).....)))))...)))))...)))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATAAAGTAGGGATGTGTAGTGAAGGCAATAGGTCTAGGTGGAGTTGGAAAAACTATAACAATGCCTATATCACATCAGATCAGATGAGATCATGAGTGA
CTGCATGAGTTTTTCCTCTCCTCCCAGACCCAGTGGCCTTAAAACTACATGACATCCCTG
dot-bracket secondary structure
.......((((((((((((((.(((((....(((((.((.((((..(((((((((......((((.....((((.(((((((......)))).)))))))
..)))).))))))))).)))).)).))))).....)))))...)))))...)))))))))
SIMILARITIES| miRBase pab-MIR3704: 1e-57 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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