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ABOUT THIS RECORD
ID:
MNEST001934
species:
Picea glauca
miRNA family:
MIR1310
source:
miRNEST
Taxonomy by NCBI:
Picea glauca
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGCATCGGGGGCGTAACGCCC
miRNA*
GCTGCTCCCCTTGTTTCTC
mismatches:
4
bulges:
2
View larger
pre-miRNA
TCTCTTCGACATG
GCTGCTCCCCTTGTTTCTC
TTGTCAATGATTAGA
GGCATCGGGGGCGTAACGCCC
TCGACCTATT
dot-bracket secondary structure
.....((((...(
(((((.(((((.((.((((
(.(((...))).)))
)).)).))))).)))..))).
))))......
SIMILARITIES
miRBase
pta-MIR1310
:
0.0000002
PMRD
pta-miR1310
:
0.0000002
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record