ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIR1171
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGATTGGAGTGGAGTGGATT miRNA* TTTTCTCCGCTCTGACGAT mismatches: 2 bulges: 2 |
pre-miRNA
CACTATTATGGATTTTCTCCGCTCTGACGATCTCCATCTACCTGGAATTGTTAACCCTACTCAACTTGCTGCCTGGATGGGATTGGATTGGAGTGGAGTG
GATTCTGATGGAT
dot-bracket secondary structure
..((((((.((((((.((((((((((.(((((.(((((((..(((....(((..........)))...)))..))))))))))))...)))))))))).)
)))))))))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CACTATTATGGATTTTCTCCGCTCTGACGATCTCCATCTACCTGGAATTGTTAACCCTACTCAACTTGCTGCCTGGATGGGATTGGATTGGAGTGGAGTG
GATTCTGATGGAT
dot-bracket secondary structure
..((((((.((((((.((((((((((.(((((.(((((((..(((....(((..........)))...)))..))))))))))))...)))))))))).)
)))))))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
