ABOUT THIS RECORDspecies: Picea glauca
miRNA family: miR950-5p
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAACATCTGGGCCACGATGGT miRNA* CATGGTGCCCCAGATGATAAG mismatches: 3 bulges: 0 |
pre-miRNA
GGTGTAGGGAAAGAGGTTTGGAAGGTGATCTTAACATCTGGGCCACGATGGTTTATTGTTCATCGTGTATTTATCATAAACCATGGTGCCCCAGATGATA
AGAGCACCTTCGCCTTCGTGCCTTGTTCCA
dot-bracket secondary structure
.......((((.(((((.(((((((((.(((((.((((((((.(((.(((((((((.((.((...)).....)).))))))))).))).)))))))).))
))).))))))).....)).))))).)))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGTGTAGGGAAAGAGGTTTGGAAGGTGATCTTAACATCTGGGCCACGATGGTTTATTGTTCATCGTGTATTTATCATAAACCATGGTGCCCCAGATGATA
AGAGCACCTTCGCCTTCGTGCCTTGTTCCA
dot-bracket secondary structure
.......((((.(((((.(((((((((.(((((.((((((((.(((.(((((((((.((.((...)).....)).))))))))).))).)))))))).))
))).))))))).....)).))))).)))).
SIMILARITIES| miRBase pab-MIR950: 2e-39 PMRD pta-miR950b: 0.0000000004 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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