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ABOUT THIS RECORD
ID:
MNEST001937
species:
Picea glauca
miRNA family:
MIRf189
source:
miRNEST
Taxonomy by NCBI:
Picea glauca
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCTATGTGTGCCCACTCTCTT
miRNA*
AGAGATATGGGCACGCAGCGCCC
mismatches:
3
bulges:
2
View larger
pre-miRNA
CTTCCGTTGAGAGCTGACAGAA
AGAGATATGGGCACGCAGCGCCC
CCCACACAAGAAATGCTAGGG
GCTATGTGTGCCCACTCTCTT
CTGTCAGCACCTT
ACCCAA
dot-bracket secondary structure
(((.....))).((((((((((
.((((..((((((((((..((((
(.................)))
))..)))))))))).))))))
)))))))).....
......
SIMILARITIES
miRBase
zma-MIR156c
:
0.00002
PMRD
zma-miR156r
:
0.000001
microPC
miR156
:
0.0003
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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