miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST001937
species: Picea glauca
miRNA family: MIRf189
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTATGTGTGCCCACTCTCTT

miRNA*
 AGAGATATGGGCACGCAGCGCCC

mismatches: 3
bulges: 2
View larger
pre-miRNA
 CTTCCGTTGAGAGCTGACAGAAAGAGATATGGGCACGCAGCGCCCCCCACACAAGAAATGCTAGGGGCTATGTGTGCCCACTCTCTTCTGTCAGCACCTT
ACCCAA

dot-bracket secondary structure
(((.....))).((((((((((.((((..((((((((((..(((((.................)))))..)))))))))).)))))))))))))).....
......


SIMILARITIES
miRBase zma-MIR156c: 0.00002

PMRD zma-miR156r: 0.000001

microPC miR156: 0.0003		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;