ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIR2644
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACTTCAGATTGATGGTTTTG miRNA* CATAAGCTGTCAGATGAGTTTCT mismatches: 3 bulges: 1 |
pre-miRNA
AGAGGAGGAGTTTCATAAGCTGTCAGATGAGTTTCTGCACAATTTACAAGAAAAACTTGAGGAATATGGAGATGAACTTCAGATTGATGGTTTTGACTTG
GACTA
dot-bracket secondary structure
.......(((((....((((((((((.((((.(((....((((((.((((.....))))..)))).)).....))).))))..)))))))))).))))).
.....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AGAGGAGGAGTTTCATAAGCTGTCAGATGAGTTTCTGCACAATTTACAAGAAAAACTTGAGGAATATGGAGATGAACTTCAGATTGATGGTTTTGACTTG
GACTA
dot-bracket secondary structure
.......(((((....((((((((((.((((.(((....((((((.((((.....))))..)))).)).....))).))))..)))))))))).))))).
.....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9ZR07|FRDA_ARATH: 0.000002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
