miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST001938
species:
Picea glauca
miRNA family:
MIR2644
source:
miRNEST
Taxonomy by NCBI:
Picea glauca
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AACTTCAGATTGATGGTTTTG
miRNA*
CATAAGCTGTCAGATGAGTTTCT
mismatches:
3
bulges:
1
View larger
pre-miRNA
AGAGGAGGAGTTT
CATAAGCTGTCAGATGAGTTTCT
GCACAATTTACAAGAAAAACTTGAGGAATATGGAGATG
AACTTCAGATTGATGGTTTTG
ACTTG
GACTA
dot-bracket secondary structure
.......(((((.
...((((((((((.((((.(((.
...((((((.((((.....))))..)))).)).....)
)).))))..)))))))))).)
)))).
.....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q9ZR07|FRDA_ARATH: 0.000002
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record