ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIR951
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTTCTTGACGACTGGACCGC miRNA* GGTCCAGACGTCAAGAACACC mismatches: 1 bulges: 0 |
pre-miRNA
CGAAAGCAAAGGTGTTCTTGACGACTGGACCGCGATAGTTGATGGGATATTACTGCAAATCTTAAAGCAAACCACGTGGTCCAGACGTCAAGAACACCTTC
GCTTC
dot-bracket secondary structure
)..((((.(((((((((((((((.((((((((((....(((.((((((..........))))))...)))....)))))))))).))))))))))))))).
)))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGAAAGCAAAGGTGTTCTTGACGACTGGACCGCGATAGTTGATGGGATATTACTGCAAATCTTAAAGCAAACCACGTGGTCCAGACGTCAAGAACACCTTC
GCTTC
dot-bracket secondary structure
)..((((.(((((((((((((((.((((((((((....(((.((((((..........))))))...)))....)))))))))).))))))))))))))).
)))).
SIMILARITIES| miRBase pab-MIR951: 6.0E-55 PMRD pta-miR951: 5.0E-12 microPC miR951: 5.0E-6 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: pab-MIR951 from miRBase (MNEST039391) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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