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ABOUT THIS RECORD
ID:
MNEST001944
species:
Picea glauca
miRNA family:
MIR3709
source:
miRNEST
Taxonomy by NCBI:
Picea glauca
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCAGATGCTTTAAATTCCCGA
miRNA*
GGGATTTAAAGCATTTGAAG
mismatches:
0
bulges:
1
View larger
pre-miRNA
AGCAGCATCGTGTGGCATAAATTCAAGAATT
TCAGATGCTTTAAATTCCCGA
CAGATTCTTGCGATGACCAAATGGATTTC
GGGATTTAAAGCATTTGAA
G
CTCTGGATTTATGCCAAACAGGAGCGCA
dot-bracket secondary structure
.((.((.((((.(((((((((((((.((.((
(((((((((((((((.(((((
..(((((...............)))))))
)))))))))))))))))))
)
.))))))))))))))).)).)).)))).
SIMILARITIES
miRBase
pab-MIR3709a
:
2e-49
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
Identical with:
pab-MIR3709a
from miRBase (
MNEST039410
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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