ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIRf351
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTCTGGCTTGGAACTTTTGA miRNA* AGAGGAGTCAGGCAGAGTCA mismatches: 3 bulges: 1 |
pre-miRNA
ACTAAGCTCTACAGAGGAGTCAGGCAGAGTCACTGGGGGAAATGGGTGGCAGAGATCAGATTACCCAGAAACAGAAGCAGACTCTGGCTTGGAACTTTTG
ATACAGCAGA
dot-bracket secondary structure
.....(((.((((((((..((((((((((((.(((.......(((((((...........)))))))....))).....)))))).))))))..))))))
.)).)))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACTAAGCTCTACAGAGGAGTCAGGCAGAGTCACTGGGGGAAATGGGTGGCAGAGATCAGATTACCCAGAAACAGAAGCAGACTCTGGCTTGGAACTTTTG
ATACAGCAGA
dot-bracket secondary structure
.....(((.((((((((..((((((((((((.(((.......(((((((...........)))))))....))).....)))))).))))))..))))))
.)).)))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q8H1E4|RAP24_ARATH: 0.00000000000001 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
