ABOUT THIS RECORDspecies: Picea glauca
miRNA family: miR3693
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGAGGGTGCTCATGAACTGCTC miRNA* GCAGCTCATGACAACCTTCTGA mismatches: 4 bulges: 0 |
pre-miRNA
AGCCCTTCAAGAGGGTGCTCATGAACTGCTCATAGGTGGCGGCTGCACAGAGGCCTTACTCAAACACAAGAGCCCAAATGGAGCAAACTTGCATCTATGA
GCAGCTCATGACAACCTTCTGAAGGGCA
dot-bracket secondary structure
.((((((((.((((((..((((((.(((((((((((((.(((.(((.((..((((((..........))).)))....))..)))...))))))))))))
)))).))))))..)))))))))))))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGCCCTTCAAGAGGGTGCTCATGAACTGCTCATAGGTGGCGGCTGCACAGAGGCCTTACTCAAACACAAGAGCCCAAATGGAGCAAACTTGCATCTATGA
GCAGCTCATGACAACCTTCTGAAGGGCA
dot-bracket secondary structure
.((((((((.((((((..((((((.(((((((((((((.(((.(((.((..((((((..........))).)))....))..)))...))))))))))))
)))).))))))..)))))))))))))).
SIMILARITIES| miRBase pab-MIR3693: 2e-67 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: pab-MIR3693 from miRBase (MNEST039394) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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