ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIRf37
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTCGGTTTGGTTCGGTTCTG miRNA* GGGCTGAGCTGAGCTGAGCTG mismatches: 1 bulges: 0 |
pre-miRNA
CCCGCGGGTCGGTTCGGTTTGGTTCGGTTCTGCCGTGTAAGAATAGTCAAAATTTCTTTGACCCGACCGGGTACAGATATATTTCGGAGGGCTGAGCTGA
GCTGAGCTGAGCCATCA
dot-bracket secondary structure
.....((.(((((((((((((((((((((((.(((.(((.((((.......)))).((((((((....)))).))))..)))..))))))))))))))))
)))))))))).))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCCGCGGGTCGGTTCGGTTTGGTTCGGTTCTGCCGTGTAAGAATAGTCAAAATTTCTTTGACCCGACCGGGTACAGATATATTTCGGAGGGCTGAGCTGA
GCTGAGCTGAGCCATCA
dot-bracket secondary structure
.....((.(((((((((((((((((((((((.(((.(((.((((.......)))).((((((((....)))).))))..)))..))))))))))))))))
)))))))))).))....
SIMILARITIES| miRBase hsa-mir-4537: 0.0004 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
