ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIR395
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGTGTTTGGGGGAACTC miRNA* GTTCCTTCAATCACTTCGTC mismatches: 2 bulges: 0 |
pre-miRNA
ATGTGTGGATGGATGGATTCGCTGAAGTGTTTGGGGGAACTCCGAGCGTCATTGAACCGCCTAAATACTGCTGCCGCATCTGCACTGGATGTACTGCTGC
CGCATCAGCTGGTTTCCAACGCCGGGAGTTCCTTCAATCACTTCGTCGCATTACATTGTGTGGATA
dot-bracket secondary structure
....((((((......)))))).((((((.(((((((((((((..((((....((((((.((.......((.((.((((((.....))))))...)).))
......)).))))))...))))..))))))))))))).)))))).((((((......))))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGTGTGGATGGATGGATTCGCTGAAGTGTTTGGGGGAACTCCGAGCGTCATTGAACCGCCTAAATACTGCTGCCGCATCTGCACTGGATGTACTGCTGC
CGCATCAGCTGGTTTCCAACGCCGGGAGTTCCTTCAATCACTTCGTCGCATTACATTGTGTGGATA
dot-bracket secondary structure
....((((((......)))))).((((((.(((((((((((((..((((....((((((.((.......((.((.((((((.....))))))...)).))
......)).))))))...))))..))))))))))))).)))))).((((((......))))))...
SIMILARITIES| miRBase pab-MIR395: 0.000000009 PMRD sly-miR395b: 0.000008 microPC miR395: 0.0001 | UniProt no hits RFAM mir-395: 0.000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
