ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIR395
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGAAGTGTTTGGAGGAACTT miRNA* GTTCCTTCAATCACTTCGCCG mismatches: 2 bulges: 0 |
pre-miRNA
CTCAATGCCGGGAGTTCCTTCAATCACTTCGCCGAATCCGAAAGCATTTCACTGAAGTGTTTGGAGGAACTTCGGGCGTCAC
dot-bracket secondary structure
....(((((.(((((((((((((.(((((((..(((...........)))..))))))).))))))))))))).)))))...
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCAATGCCGGGAGTTCCTTCAATCACTTCGCCGAATCCGAAAGCATTTCACTGAAGTGTTTGGAGGAACTTCGGGCGTCAC
dot-bracket secondary structure
....(((((.(((((((((((((.(((((((..(((...........)))..))))))).))))))))))))).)))))...
SIMILARITIES| miRBase pab-MIR395: 2e-41 PMRD zma-miR395e: 0.001 microPC miR395: 1e-27 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR395 from microPC (MNEST046453) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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