ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTCCCTATTCCTCCCATT miRNA* TGGGAGGATAGGAGAAGGCT mismatches: 1 bulges: 2 |
pre-miRNA
ATGTGGATGGAAGTCTTGAGGATTGGGAGGATAGGAGAAGGCTGTTTGCTTAATTCTCAGTTGAAACCTGATTAGTCTTCCCTATTCCTCCCATTCCTAT
TGCCTCCATCACACA
dot-bracket secondary structure
.((((((((((.((....((((.((((((((((((.((((((((.(((.(((((.....)))))....))).)))))))))))).)))))))).))))..
.)).)))))).))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGTGGATGGAAGTCTTGAGGATTGGGAGGATAGGAGAAGGCTGTTTGCTTAATTCTCAGTTGAAACCTGATTAGTCTTCCCTATTCCTCCCATTCCTAT
TGCCTCCATCACACA
dot-bracket secondary structure
.((((((((((.((....((((.((((((((((((.((((((((.(((.(((((.....)))))....))).)))))))))))).)))))))).))))..
.)).)))))).))))
SIMILARITIES| miRBase pab-MIR482b: 7e-61 PMRD pta-miR482c: 0.0000004 microPC miR482: 0.0003 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: pab-MIR482b from miRBase (MNEST039384) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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