ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIRf869
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTCAAGAAAGCCGTGGAAAAG miRNA* TTCCCACGGCTTGCTTGAGCT mismatches: 2 bulges: 0 |
pre-miRNA
CCTCTATATTTTCCCACGGCTTGCTTGAGCTTCTTATCCGGATCTGTTAGCGGTCGGGAAGTTCAAGAAAGCCGTGGAAAAGTATGACA
dot-bracket secondary structure
....((((((((.(((((((((.((((((((((((..(((..........)))..)))))))))))).))))))))).))))))))...
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCTCTATATTTTCCCACGGCTTGCTTGAGCTTCTTATCCGGATCTGTTAGCGGTCGGGAAGTTCAAGAAAGCCGTGGAAAAGTATGACA
dot-bracket secondary structure
....((((((((.(((((((((.((((((((((((..(((..........)))..)))))))))))).))))))))).))))))))...
SIMILARITIES| miRBase pab-MIR396c: 0.00000000002 PMRD pta-miR396: 0.00000002 microPC miR396: 0.00000000007 | UniProt no hits RFAM MIR396: 0.0000003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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