ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIRf591
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGCAAGTCATTCTTGGCTGAG miRNA* TTGCCAAGAACAACTTGCCCG mismatches: 3 bulges: 0 |
pre-miRNA
GTCCTCATGCAGGGCCTGGCATGAAAAGCAGAGAGGGACACTTTGCCAAGAACAACTTGCCCGCAAGACTGTAATGCGTTTGTGGAACAATAATGCACAG
CAGTATGCGGGCAAGTCATTCTTGGCTGAGTATGGCTATCTGCCTCGACATGCGAGAGCCTACACGAAT
dot-bracket secondary structure
...........((((((.(((((....(((((...((..((((.((((((((..(((((((((((..(((((..((((((..((...))..))))))..)
)))).)))))))))))..)))))))).))))....)).))))).....))))).)).))))........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTCCTCATGCAGGGCCTGGCATGAAAAGCAGAGAGGGACACTTTGCCAAGAACAACTTGCCCGCAAGACTGTAATGCGTTTGTGGAACAATAATGCACAG
CAGTATGCGGGCAAGTCATTCTTGGCTGAGTATGGCTATCTGCCTCGACATGCGAGAGCCTACACGAAT
dot-bracket secondary structure
...........((((((.(((((....(((((...((..((((.((((((((..(((((((((((..(((((..((((((..((...))..))))))..)
)))).)))))))))))..)))))))).))))....)).))))).....))))).)).))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC miR169: 2e-18 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
