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ABOUT THIS RECORD

ID: MNEST001982
species: Picea glauca
miRNA family: MIR1309
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGATGGCCTTTTTGAAGGACA

miRNA*
 TCTTTTTAAAAAAGGTTATCAGA

mismatches: 2
bulges: 2
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pre-miRNA
 GTTTCAACCCTGATGGAATTCTTTCTTTTTAAAAAAGGTTATCAGAAAGATTCAAAGTTTGCAATAAGGAGAGGTTACCAAGAGATGGCGAAAGGGTACC
TCCAACCCTAATTATGGGAACACATTTATGGCAACCAGTGTTATAGTGTGTTTTTACCACCAAATACCATTCCACGAGCATATGTTCTCTGAGTTCTCTG
CGGCCCAGTTGGACGGAGATACAGTTGGATCGGATTTGATGGCCTTTTTGAAGGACAAAAAGCCTCCACGTCTGTGC

dot-bracket secondary structure
((((((.......))))))....((((((..(((((((((((((((..(((((((.(((((......((((.((((.(((.....))).)..(((((...
....))))).(((.(((((((((..((((((((.....)))))))).))))))...)))...)))))).)))).)))))...((((((((..((((.(((
.....)))..))))))))).))).)))))))...)))))))))))))))))))))...........(((....))).


SIMILARITIES
miRBase pta-MIR1309: 4e-21

PMRD pta-miR1309: 4e-21

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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