miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST001996
species:
Picea sitchensis
miRNA family:
miR482d
source:
miRNEST
Taxonomy by NCBI:
Picea sitchensis
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGCTTGCGAGGATAGGAAAAA
miRNA*
TTTCCCACTCCTCCCAAGCCCA
mismatches:
3
bulges:
1
View larger
pre-miRNA
CGCAAGGGGAGAAAGGCCAAA
GGCTTGCGAGGATAGGAAAAA
CTCGTGTGGTGTATTTTCTCACTCACCGATCTACAGTT
TTTCCCACTCCTCCCAAGCC
CA
TGGCCTTGCCTTCCCTGT
dot-bracket secondary structure
....(((((((.(((((((..
((((((.(((((..(((((((
((.((((((((............)))))...)))))))
)))))...))))).))))))
..
)))))))..)))))))..
SIMILARITIES
miRBase
pab-MIR482d
:
4e-50
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
Identical with:
pab-MIR482d
from miRBase (
MNEST039386
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record