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ABOUT THIS RECORD

ID: MNEST002006
species: Picea sitchensis
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Picea sitchensis Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTTTCCTACTCCTCCCATTCC

miRNA*
 AGTGGGAGCAGAGGATAAGACT

mismatches: 1
bulges: 2
View larger
pre-miRNA
 TTGTGGATGGAAGTCTTGAGGAGTGGGAGCAGAGGATAAGACTGCTGCTTTGAATATTATCAGTCTTTCCTACTCCTCCCATTCCTATTGGCTTCACCAC
ACA

dot-bracket secondary structure
.(((((...((((((...(((((((((((.((((((.(((((((.((..........)).))))))))))).)).)))))))))))...)))))).))))
)..


SIMILARITIES
miRBase pab-MIR482c: 9e-54

PMRD vvi-miR482: 0.000000001

microPC miR482: 1e-31		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: miR482 from microPC (MNEST046004)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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