miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST002007
species: Picea sitchensis
miRNA family: MIR319
source: miRNEST

Taxonomy by NCBI:
Picea sitchensis Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGTTTGAAGGGAGCTCTAC

miRNA*
AGAGTTCCTTTTATACCAATC

mismatches: 1
bulges: 0

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pre-miRNA
CCAGTAAATGGTAGAGTTCCTTTTATACCAATCAAGGCCTGTGCAAAAGTGATCCGACTGCCGATTTATGCATCCTTCTGCCCTGCCAGTGTTCGTTGTT
ACAGGCCCGATTTCATTGCAGGTTAGTGGTGTGCATAAGGCGGGAGTTGTATTGATTTTGTGTTGCCCTCGTTTGGTTTGAAGGGAGCTCTACTGGGCGA
TT


dot-bracket secondary structure
...((...(((((((((((((((((.(((((....(((...(((((((.((((.(((((.(((.(((((((((.((.(((.(((((.((((.(((..((.
....)).)))...))))))))).))).)).))))))))).))).))))).)))).)))))))..))).....))))).))))))))))))))))).))..
..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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