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ABOUT THIS RECORD
ID:
MNEST002007
species:
Picea sitchensis
miRNA family:
MIR319
source:
miRNEST
Taxonomy by NCBI:
Picea sitchensis
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGTTTGAAGGGAGCTCTAC
miRNA*
AGAGTTCCTTTTATACCAATC
mismatches:
1
bulges:
0
View larger
pre-miRNA
CCAGTAAATGGT
AGAGTTCCTTTTATACCAATC
AAGGCCTGTGCAAAAGTGATCCGACTGCCGATTTATGCATCCTTCTGCCCTGCCAGTGTTCGTTGTT
ACAGGCCCGATTTCATTGCAGGTTAGTGGTGTGCATAAGGCGGGAGTTGTATTGATTTTGTGTTGCCCTCGT
TTGGTTTGAAGGGAGCTCTAC
TGGGCGA
TT
dot-bracket secondary structure
...((...((((
(((((((((((((.(((((..
..(((...(((((((.((((.(((((.(((.(((((((((.((.(((.(((((.((((.(((..((.
....)).)))...))))))))).))).)).))))))))).))).))))).)))).)))))))..))).....
))))).)))))))))))))))
)).))..
..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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