ABOUT THIS RECORDspecies: Pinus taeda
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Pinus taeda Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCATCATCATCATCATCATCA miRNA* GCGGAGACGGTGGCGATGGGA mismatches: 5 bulges: 0 |
pre-miRNA
ATGGTAAGCATCATCATCATCATCATCATCAGCATTCTGGAGCGTGCTGTGGCGGAGACGGTGGCGATGGGAAATT
dot-bracket secondary structure
........((((.(((((.((.((.(((.((((((........))))))))).)).)).))))).)))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
ATGGTAAGCATCATCATCATCATCATCATCAGCATTCTGGAGCGTGCTGTGGCGGAGACGGTGGCGATGGGAAATT
dot-bracket secondary structure
........((((.(((((.((.((.(((.((((((........))))))))).)).)).))))).)))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
