ABOUT THIS RECORDspecies: Poncirus trifoliata
miRNA family: MIR413
source: miRNEST
SEQUENCE & STRUCTURE| miRNA GTTGTTTCTCTTGTTGATTTC miRNA* AAGCAGCAGCGGGAGCGACGA mismatches: 2 bulges: 0 |
pre-miRNA
TTTTGCGATCAGTTGTTTCTCTTGTTGATTTCATCAAGTGCTAGAGCTGTCATCTCAGATTCAAAAAAGCCAATCATAATCATGAAGTCTGATGCCGCTA
CGGCCCATAGCCATGGAGGTAGAGGACAATCTTCTTTTGAAAGATTACGTAGAAAATTGTCATTCCCCCCAAAGACAAAGAAGGCAGACAGCAAGGAGGG
CTCTCTTTCACTTCCACTTGTCTTAAAGGACGAAACTGAAAGCAGCAGCGGGAGCGACGAGGAGCTTC
dot-bracket secondary structure
....((..((.(((((((((.((((((.(((((..(((((..((.((((((...(((((((((...................)))).)))))((((.((.
.(((.....))).(((.((.((..((((((.((((.((....))......)))).)))))).)).)).))).......))..))))))))))..((((((
...)))))).))..)))))((((....)))).....))))).)))))).)))))))))))...))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTTTGCGATCAGTTGTTTCTCTTGTTGATTTCATCAAGTGCTAGAGCTGTCATCTCAGATTCAAAAAAGCCAATCATAATCATGAAGTCTGATGCCGCTA
CGGCCCATAGCCATGGAGGTAGAGGACAATCTTCTTTTGAAAGATTACGTAGAAAATTGTCATTCCCCCCAAAGACAAAGAAGGCAGACAGCAAGGAGGG
CTCTCTTTCACTTCCACTTGTCTTAAAGGACGAAACTGAAAGCAGCAGCGGGAGCGACGAGGAGCTTC
dot-bracket secondary structure
....((..((.(((((((((.((((((.(((((..(((((..((.((((((...(((((((((...................)))).)))))((((.((.
.(((.....))).(((.((.((..((((((.((((.((....))......)))).)))))).)).)).))).......))..))))))))))..((((((
...)))))).))..)))))((((....)))).....))))).)))))).)))))))))))...))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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