ABOUT THIS RECORDspecies: Poncirus trifoliata
miRNA family: MIRf398
source: miRNEST
SEQUENCE & STRUCTURE| miRNA CATCTTCATCGTCATCACAAG miRNA* TGTGAAGAAGAGGAAGATGGA mismatches: 5 bulges: 0 |
pre-miRNA
ACGCGTCCGAGCGAATGGAGGATGTGAAGAAGAGGAAGATGGAGGATGATAATATTTTAATCAACGGCCAAGATTTTAATTCATCTTCATCGTCATCACA
AGATCACCTGCGTTCTTTACT
dot-bracket secondary structure
........(((((...((.((.(((((.((.((.(((((((((...(((....(((((...........))))).))).))))))))).)).)).)))))
...)).))..)))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ACGCGTCCGAGCGAATGGAGGATGTGAAGAAGAGGAAGATGGAGGATGATAATATTTTAATCAACGGCCAAGATTTTAATTCATCTTCATCGTCATCACA
AGATCACCTGCGTTCTTTACT
dot-bracket secondary structure
........(((((...((.((.(((((.((.((.(((((((((...(((....(((((...........))))).))).))))))))).)).)).)))))
...)).))..)))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
