ABOUT THIS RECORDspecies: Poncirus trifoliata
miRNA family: MIR414
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TCATCTTCATCATCATCCGCC miRNA* TGGTGGTCGTGGCGTGATG mismatches: 2 bulges: 2 |
pre-miRNA
GGGTAAAGTTGGTGGTGGTCGTGGCGTGATGGGATTTTGTATCTGTCCGTTAGAGACTCCGGCGAGGCTACTGTGGACCACTAGCTTCTTCCGCCACAAG
CTTATGATTTTCTAATAATTTTCATAATTTTAATTACAAAATCACCATCATCTTCATCATCATCCGCCTCATAAAAA
dot-bracket secondary structure
..........(((((((((.((((.((((((((((((((((...(((.......)))...((((((((((.((.....)).)))))))....)))..(((
.((((((..((.....))...)))))).)))...))))))))).)))))))..)))).)))).))))).........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GGGTAAAGTTGGTGGTGGTCGTGGCGTGATGGGATTTTGTATCTGTCCGTTAGAGACTCCGGCGAGGCTACTGTGGACCACTAGCTTCTTCCGCCACAAG
CTTATGATTTTCTAATAATTTTCATAATTTTAATTACAAAATCACCATCATCTTCATCATCATCCGCCTCATAAAAA
dot-bracket secondary structure
..........(((((((((.((((.((((((((((((((((...(((.......)))...((((((((((.((.....)).)))))))....)))..(((
.((((((..((.....))...)))))).)))...))))))))).)))))))..)))).)))).))))).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-598: 0.0006 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
